Job Description P16885 Confidence 97.77% Date Sat Jun 16 10:20:27 BST 2012 Rank 353 Aligned Residues 142 % Identity 12% Template c2l2eA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calcium-binding protein ncs-1; PDBTitle: solution nmr structure of myristoylated ncs1p in apo form Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure											.																																									.
Query SS confidence											.																																									.
Query Sequence		S	W	L	R	K	Q	I	Y	S	.	V	D	Q	T	R	R	N	S	I	S	L	R	E	L	K	T	I	L	P	L	I	N	F	K	V	S	S	A	K	F	L	K	D	K	F	V	E	I	G	A	.	H	K	D	E	L	S	F	E	Q	F	H	L	F	Y	K	K	L	M	F	E	Q	Q	K	S	I	L	D	E	F
Query Conservation											.																																									.
Alig confidence											.																																									.
Template Conservation
Template Sequence		K	E	L	Q	Q	W	Y	K	G	F	F	K	D	C	P	S	G	H	L	N	K	S	E	F	Q	K	I	Y	K	Q	F	F	P	F	G	D	P	S	A	F	A	E	Y	V	F	N	V	F	D	A	D	K	N	G	Y	I	D	F	K	E	F	I	C	A	L	S	V	T	S	R	G	E	L	N	D	K	L	I	W	A
Template Known Secondary structure															S																					S															S	S	S	T	T												T	T	S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.										.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.
Query Sequence		K	K	D	S	S	V	F	I	L	G	N	T	D	R	P	D	A	S	A	V	Y	L	H	D	F	Q	R	F	L	I	H	E	.	.	.	.	.	.	.	.	.	Q	Q	E	H	W	A	Q	D	L	N	K	V	R	E	R	M	T	K	F	I	D	D	T	M	R	E	T	A	E	P	F	L	F	V	D	E	F	L	T
Query Conservation																																		.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template Sequence		F	Q	L	Y	D	.	.	.	.	.	.	.	.	L	D	N	N	G	L	I	S	Y	D	E	M	L	R	I	V	D	A	I	Y	K	M	V	G	S	M	V	K	L	P	E	D	E	D	T	P	E	K	R	V	N	K	I	F	N	M	M	.	.	.	.	.	D	K	N	K	D	G	Q	L	T	L	E	E	F	C	E
Template Known Secondary structure							.	.	.	.	.	.	.	.	T	T	S		S		B																				S				S	S				T												.	.	.	.	.	T			S	S			B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template SS confidence
		105	.	.	.	.									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		293	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	F	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	K	R	D	P
Template Known Secondary structure					T		T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions