Job Description P16885 Confidence 97.33% Date Sat Jun 16 10:20:27 BST 2012 Rank 456 Aligned Residues 139 % Identity 14% Template c2julA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:calsenilin; PDBTitle: nmr structure of dream Resolution UNK

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		143	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure													.																																								.
Query SS confidence													.																																								.
Query Sequence		E	S	W	L	R	K	Q	I	Y	S	V	.	D	Q	T	R	R	N	S	I	S	L	R	E	L	K	T	I	L	P	L	I	N	F	K	V	S	S	A	K	F	L	K	D	K	F	V	E	I	G	A	.	H	K	D	E	L	S	F	E	Q	F	H	L	F	Y	K	K	L	M	F	E	Q	Q	K	S	I	L	D	E
Query Conservation													.																																								.
Alig confidence													.																																								.
Template Conservation
Template Sequence		K	K	E	L	Q	S	L	Y	R	G	F	K	N	E	C	P	T	G	L	V	D	E	D	T	F	K	L	I	Y	S	Q	F	F	P	Q	G	D	A	T	T	Y	A	H	F	L	F	N	A	F	D	A	D	G	N	G	A	I	H	F	E	D	F	V	V	G	L	S	I	L	L	R	G	T	V	H	E	K	L	K	W
Template Known Secondary structure																	T	T	S	S																S	S													S	S		S			S				S												S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.										.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		F	K	K	D	S	S	V	F	I	L	G	N	T	D	R	P	D	A	S	A	V	Y	L	H	D	F	Q	R	F	L	I	H	E	.	.	.	.	.	.	.	.	.	Q	Q	E	H	W	A	Q	D	L	N	K	V	R	E	R	M	T	K	F	I	D	D	T	M	R	E	T	A	E	P	F	L	F	V	D	E	F	L
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template Sequence		A	F	N	L	Y	D	.	.	.	.	.	.	.	.	I	N	K	D	G	C	I	T	K	E	E	M	L	A	I	M	K	S	I	Y	D	M	M	G	R	H	T	Y	P	I	L	R	E	D	A	P	L	E	H	V	E	R	F	F	Q	K	M	.	.	.	.	.	D	R	N	Q	D	G	V	V	T	I	D	E	F	L
Template Known Secondary structure						T		.	.	.	.	.	.	.	.		S	S	S	S		B																					S			S																S	.	.	.	.	.			S	T	T		S	B
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																																.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.
		292	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions