 |
| Job Description | P16885 | | Confidence | 97.54% | Date | Sat Jun 16 10:20:27 BST 2012 |
| Rank | 405 | Aligned Residues | 55 |
| % Identity | 33% | Template | c2j6kE_ |
| PDB info |
PDB header:protein binding | Chain: E: PDB Molecule:cd2-associated protein; |
PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog)
|
| Resolution | 2.78 Å |
|
|   |   |
774 | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | K | A | L | Y | D | Y | K | A | K | R | S | D | E | L | S | F | C | R | G | A | L | I | H | N | V | S | K | E | P | G | G | W | W | K | G | D | Y | G | T | R | I | Q | Q | Y | F | P | S | N | Y | V | E | D | I | S |
| Query Conservation |   |
|
|
|
|   |
|
|   |
|   |   |   |
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |
|   |
|
|
|   |
|
|   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |
| Template Sequence |   |
Y | I | V | E | Y | D | Y | D | A | V | H | D | D | E | L | T | I | R | V | G | E | I | I | R | N | V | K | K | L | Q | E | E | G | W | L | E | G | E | L | N | G | R | R | G | M | F | P | D | N | F | V | K | E | I | K |
| Template Known Secondary structure |   |
 |  |  |
| S |
| B |
|
| S | S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |  |
| S | S | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  |  |
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|