Job Description P16885 Confidence 97.68% Date Sat Jun 16 10:20:27 BST 2012 Rank 377 Aligned Residues 130 % Identity 12% Template c2hpkA_ PDB info PDB header:luminescent protein Chain: A: PDB Molecule:photoprotein berovin; PDBTitle: crystal structure of photoprotein berovin from beroe2 abyssicola Resolution 2.00 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.														.
Query SS confidence																																				.	.	.	.	.	.	.	.														.
Query Sequence		L	R	K	Q	I	Y	S	V	D	Q	T	R	R	N	S	I	S	L	R	E	L	K	T	I	L	P	L	I	N	F	K	V	S	S	.	.	.	.	.	.	.	.	A	K	F	L	K	D	K	F	V	E	I	G	A	.	H	K	D	E	L	S	F	E	Q	F	H	L	F	Y	K	K	L	M	F	E	Q	Q	K	S
Query Conservation																																				.	.	.	.	.	.	.	.														.
Alig confidence																																				.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		L	Y	K	R	F	D	T	F	D	L	D	S	D	G	K	X	E	X	D	E	V	L	Y	W	P	D	R	X	R	Q	L	V	N	A	T	D	E	Q	V	E	K	X	R	D	A	V	R	V	F	F	L	H	K	G	V	E	P	V	N	G	L	L	R	E	D	W	V	E	A	N	R	V	F	A	E	A	E	R	E	R
Template Known Secondary structure											T	T		S	S								T										S																					T	T		B	T	T	T	B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
														217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	L	D	E	F	K	K	D	S	S	V	F	I	L	G	N	T	D	R	P	D	A	S	A	V	Y	L	H	D	F	Q	R	F	L	I	H	E	Q	Q	E	H	W	A	Q	D	L	N	K	V	R	E	R	M	T	K	F	I	D	D	T	M	R	E	T	A	E	P	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.	.
Template Sequence		E	R	R	G	E	P	S	L	I	A	L	L	S	N	S	Y	Y	D	V	L	D	.	.	.	.	.	.	.	.	.	D	D	G	D	G	T	V	D	V	D	E	L	K	T	X	X	K	A	F	D	.	.	.	.	.	V	P	Q	E	A	A	Y	T	F	F	E	K	A	.	.	.	.	.	D	T	D	K	S	G	K
Template Known Secondary structure				T	T																		.	.	.	.	.	.	.	.	.	T	T		S	S	S	B												T	T	.	.	.	.	.	S		T	T										.	.	.	.	.		T	T			S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.														.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	V	D	E	F	L	T	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	R	T	E	L	V	H	L	F
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions