Return to main results Retrieve Phyre Job Id

Job DescriptionP16885
Confidence98.09%DateSat Jun 16 10:20:27 BST 2012
Rank258Aligned Residues66
% Identity24%Templatec2ebpA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sh3 domain from human sam and sh32 domain containing protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   767..770.........780 .........790.........800.........810.........820.........830...
Predicted Secondary structure 













..




















































Query SS confidence 













. .




















































Query Sequence  PSMPQRTVKALYDY. . KAKRSDELSFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISTADFE
Query Conservation        




 

.. 
   




 
 
 
 

 
   
 


 

 
    



 
 
   
   
Alig confidence 













..






























.




















Template Conservation 
 
  




   
       




  



 
      


 
  . 
  
 

  


 
     
Template Sequence  SSGFCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLL. NNKVGTFKFIYVDVLSSGPSS
Template Known Secondary structure 



S
S
B


TT

SB

B
SS


SSS

.SS

STT



S

Template Predicted Secondary structure 


























.











Template SS confidence 




































































   5....10.........20.........30.........40.........50. ........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions