Return to main results Retrieve Phyre Job Id

Job DescriptionP16885
Confidence99.21%DateSat Jun 16 10:20:27 BST 2012
Rank83Aligned Residues102
% Identity29%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   635....640.........650.........660.........670.... .....680.........690.........700.........710...
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Query Sequence  VPNPNPHESKPWYYDSLSRGEAEDMLMRIPRDGAFLIRKR. EGSDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESL
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Template Sequence  EGPPQDLSVHLWYAGPMERAGAESILA. NRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGL
Template Known Secondary structure 


SS
GGGSSSB

S

TT.TS
TT

SSTT


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   17..20.........30.........40... ......50.........60.........70.........80.........90.....
 
   714.....720........ .730.......
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Query Sequence  VELVSYYEKHSLYRK. . . . . MRLRYPVTP
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Template Sequence  TELVEFYQQNSLKDCFKSLDTTLQFPFKE
Template Known Secondary structure  TTS
GGGT
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   96...100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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