Job Description P16885 Confidence 97.18% Date Sat Jun 16 10:20:27 BST 2012 Rank 491 Aligned Residues 149 % Identity 9% Template c2ccmB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:calexcitin; PDBTitle: x-ray structure of calexcitin from loligo pealeii at 1.8a Resolution 1.8 Å

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		146	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.															.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		L	R	K	Q	I	Y	S	V	.	D	Q	T	R	R	N	S	I	S	L	R	E	L	K	T	I	L	P	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	K	V	S	S	A	K	F	L	K	D	K	F	V	E	I	G	A	.	H	K	D	E	L	S	F	E	Q	F	H	L	F	Y	K	K	L
Query Conservation										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		I	L	R	V	F	N	T	F	Y	D	C	N	H	D	G	V	I	E	W	D	D	F	E	L	A	I	K	K	I	C	N	L	H	S	W	P	T	D	G	K	K	H	N	E	A	R	A	T	L	K	L	I	W	D	G	L	R	K	Y	A	D	E	N	E	D	E	Q	V	T	K	E	E	W	L	K	M	W	A	E	C
Template Known Secondary structure									T	T		T	T		S	S																		T	T			T	T	S																							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	F	.	E	Q	Q	K	S	I	L	D	E	F	K	K	D	S	S	V	F	I	L	G	N	T	D	R	P	D	A	S	A	V	Y	L	H	D	F	Q	R	F	L	I	H	E	Q	Q	E	H	W	A	Q	D	L	N	K	V	R	E	R	M	T	K	F	I	D	D	T	M	R	E	T	A	E	P	F	L	F	V	D
Query Conservation				.
Alig confidence				.																																												.	.	.	.	.														.	.	.	.	.
Template Conservation																																																.	.	.	.	.														.	.	.	.	.
Template Sequence		V	K	S	V	E	K	G	E	S	L	P	E	W	L	T	K	Y	M	N	F	M	F	D	V	N	D	T	S	G	D	N	I	I	D	K	H	E	Y	S	T	V	Y	M	S	Y	G	.	.	.	.	.	I	P	K	S	D	C	D	A	A	F	D	T	L	.	.	.	.	.	S	D	G	G	K	T	M	V	T	R	E
Template Known Secondary structure							T	T																				T	T		S	S	B											G	G	G	T	.	.	.	.	.														.	.	.	.	.	T	G	G	G	T	S			B
Template Predicted Secondary structure																																																.	.	.	.	.														.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.
		289	290	.					.	.	.	.	.	.	.						.	300	.	.	.	.
Predicted Secondary structure					.	.	.	.								.	.	.	.	.
Query SS confidence					.	.	.	.								.	.	.	.	.
Query Sequence		E	F	L	.	.	.	.	T	Y	L	F	S	R	E	.	.	.	.	.	N	S	I	W	D	E
Query Conservation					.	.	.	.								.	.	.	.	.
Alig confidence					.	.	.	.								.	.	.	.	.
Template Conservation
Template Sequence		I	F	A	R	L	W	T	E	Y	F	V	S	N	D	R	G	A	K	G	N	H	L	F	G	T
Template Known Secondary structure																T	T		G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions