 |
| Job Description | P16885 | | Confidence | 99.15% | Date | Sat Jun 16 10:20:27 BST 2012 |
| Rank | 104 | Aligned Residues | 107 |
| % Identity | 19% | Template | c2b3rA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:phosphatidylinositol-4-phosphate 3-kinase c2 domain- |
PDBTitle: crystal structure of the c2 domain of class ii phosphatidylinositide2 3-kinase c2
|
| Resolution | 2.30 Å |
|
 |
|   |   |
1062 | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | |
|
|
. | . | . | 1130 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | L | T | V | K | V | L | G | A | R | H | L | P | K | L | G | R | S | I | A | C | P | F | V | E | V | E | I | C | G | A | E | Y | D | N | N | K | F | K | T | T | V | V | N | D | N | G | L | S | P | I | W | A | P | T | Q | E | K | V | T | F | E | I | Y | D | . |
. |
. |
P | N | L | A | F | L | R | F | V | V | Y | E |
| Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |
|
|   |
|   |
|   |
|   |   | . | . | . |
|
|
|
|   |
|
|
|   |
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
| Template Sequence |   |
T | L | F | I | M | V | M | H | I | K | D | L | V | T | E | D | G | A | D | P | N | P | Y | V | K | T | Y | L | L | P | D | T | H | K | T | S | K | R | K | T | K | I | . |
S | R | K | T | R | N | P | T | F | . |
. |
. |
N | E | M | L | V | Y | S | G | Y | S | K | E | T | L | R | Q | R | E | L | Q | L | S | V | L | S |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T | S |
|
|
|
|  |  |  |  |  |  |  |  | S |
| S | S | S |
|
|
|  |  |
|
|
| . |
|
| S |
| S | S |
|  |  | . | . | . |  |  |  |  |  |  |  | S |
|
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1396 | . | . | . | 1400 | . | . | . | . | . | . | . | . | . | 1410 | . | . | . | . | . | . | . | . | . | 1420 | . | . | . | . | . | . | . | . | . | 1430 | . | . | . | . | . | . | . | |
. | . | 1440 | . | . | . | . | . | . | |
|
|
. | . | . | 1450 | . | . | . | . | . | . | . | . | . | 1460 | . | . | . | . | . | . | . | . | . | 1470 | . |
|   |
|   |   |
1139 | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | D | M | F | S | D | P | N | F | L | A | H | A | T | Y | P | I | K | A | V | K | S | G | F | R | S | V | P | L | K | N | G | Y | S |
| Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |
| Template Sequence |   |
A | E | S | L | R | E | N | F | F | L | G | G | I | T | L | P | L | K | D | F | N | L | S | K | E | T | V | K | W | Y | Q | L | T | A |
| Template Known Secondary structure |   |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  | G | G | G | S |
| T | T | S |
|  |  |  |  |  |  |
| B |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1472 | . | . | . | . | . | . | . | 1480 | . | . | . | . | . | . | . | . | . | 1490 | . | . | . | . | . | . | . | . | . | 1500 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|