Return to main results Retrieve Phyre Job Id

Job DescriptionQ13601
Confidence99.86%DateWed May 9 17:52:34 BST 2012
Rank2Aligned Residues100
% Identity24%Templated1tuaa2
SCOP infoEukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I)
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160 .........170.........180.........190.........200.........210.....
Predicted Secondary structure 




.









..
Query SS confidence 





















.






















































. .
Query Sequence  DVACDIIKIGSLVRNKERFVKR. RQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHP. .
Query Conservation       

 
            
.  



  
 
   

 

   
 
 
 

 


        
  
     
 

..
Alig confidence 





















.






















































..
Template Conservation 
  





          
 
  





 
 

  

  

  
 
    
 
 
    
  

  

 

 
  
  
Template Sequence  DQILVVVDLKQVVGDSQNHLKRIKGRIIGEGGRARRTIEEMTDTYINVGEYEVAIIGDYERAMAAKQAIEMLAEGRMHST
Template Known Secondary structure 
TTT

GGGT

SSTT

Template Predicted Secondary structure 



















Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   216...220.........230.........240.
Predicted Secondary structure 



Query SS confidence 

























Query Sequence  IYNIKSLMIKRELAKDSELRSQSWER
Query Conservation 

 

 
 

 

 

  

 
 
 
Alig confidence 







.







..






Template Conservation 

  

  .   
    ..  
 
  
Template Sequence  VYRHLERI. MREIKRRE. . RLKMWAR
Template Known Secondary structure  ...
Template Predicted Secondary structure  ...
Template SS confidence 

























   165....170.. .......180 .......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions