Job Description Q13601 Confidence 97.75% Date Wed May 9 17:52:34 BST 2012 Rank 9 Aligned Residues 131 % Identity 13% Template c2jvzA_ PDB info PDB header:splicing Chain: A: PDB Molecule:far upstream element-binding protein 2; PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp Resolution UNK

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		V	Q	K	A	L	N	E	H	H	V	N	A	T	L	.	.	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R
Query Conservation																.	.
Alig confidence																.	.																																						.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		I	K	Q	L	Q	E	R	A	G	V	K	M	I	L	I	Q	D	G	S	Q	N	T	N	V	D	K	P	L	R	I	I	G	D	P	Y	K	V	Q	Q	A	C	E	M	V	M	D	I	L	R	E	R	D	Q	.	.	.	.	.	.	G	G	F	G	D	R	N	E	Y	G	S	R	I	G	G	G	I	D	V	P	V
Template Known Secondary structure								T	S		S								T	T	S	S	S	S	S																								T	T		S	S	S	.	.	.	.	.	.				S	S		S	S		T	T	S		S	S	S	B
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence		F	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	I	M	V	Q	G	N	.	.	.	.	.	.	.	T	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M	K	N	I	H	P
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	H	S	V	G	V	V	I	G	R	S	G	E	M	I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	Q	D	D	G	T	G	P	E	K	I	A	H	I	M	G	P	P	D	R	C	E	H	A	A	R	I	I	N	D	L	L	Q	S	L	R	S
Template Known Secondary structure			T	T	T							S	S	S										T											T	T	S	S								S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions