Job Description Q13601 Confidence 99.66% Date Wed May 9 17:52:34 BST 2012 Rank 3 Aligned Residues 160 % Identity 26% Template c2e3uA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein ph1566; PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3 Resolution 2.30 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	S	F	A	T	L	F	P	K	Y	R	E	A	Y	L	K	E	C	W	P	L	V	Q	K	A	L	.	N	E	H	H	V	N	A	T	L	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		Q	E	E	Y	V	K	I	P	K	D	R	I	A	V	L	I	G	K	K	G	Q	T	K	K	E	I	E	K	R	T	K	T	K	I	T	I	D	S	E	T	G	E	V	W	I	T	S	T	K	E	T	E	D	P	L	A	V	W	K	A	R	D	I	V	L	A	I	G	R	G	F	S	P	E	R	A	F	R	L	L
Template Known Secondary structure																			G	G	G											T							T	T	T									T	T			S																T	T							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	I	M	V	Q	G	N	T	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M	K	N	I	.	.	H
Query Conservation																																																																															.	.
Alig confidence																							.	.	.	.																																																					.	.
Template Conservation																							.	.	.	.
Template Sequence		N	E	G	E	Y	L	E	I	I	N	L	T	D	I	I	A	L	P	R	V	R	.	.	.	.	G	R	I	I	G	R	K	G	R	T	R	Q	I	I	E	E	M	S	G	A	S	V	S	V	Y	G	K	T	V	A	I	I	G	N	P	I	Q	I	E	I	A	K	T	A	I	E	K	L	A	R	G	S	P	H	G
Template Known Secondary structure		S	T	T								G	G	G									.	.	.	.						G	G	G																		T	T																							T	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	Y	N	I	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	Y	R	Y	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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