Job Description Q13601 Confidence 97.43% Date Wed May 9 17:52:34 BST 2012 Rank 18 Aligned Residues 118 % Identity 14% Template c2anrA_ PDB info PDB header:rna-binding protein/rna Chain: A: PDB Molecule:neuro-oncological ventral antigen 1; PDBTitle: crystal structure (ii) of nova-1 kh1/kh2 domain tandem with 25nt rna2 hairpin Resolution 1.94 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		V	Q	K	A	L	N	E	H	H	V	N	A	T	L	D	.	.	.	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																								.	.	.	.	.														.	.	.	.	.
Template Conservation																																																											.	.	.	.	.														.	.	.	.	.
Template Sequence		I	V	Q	L	Q	K	E	T	G	A	T	I	K	L	S	K	S	K	D	F	Y	P	G	T	T	E	R	V	C	L	I	Q	G	T	I	E	A	L	N	A	V	H	G	F	I	A	E	K	I	R	E	X	P	Q	N	P	D	.	.	.	.	.	R	A	N	Q	V	K	I	I	V	P	N	S	T	.	.	.	.	.
Template Known Secondary structure																		T	T		B		T	T	S	S																									T							G	.	.	.	.	.	G	G	G											.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.														.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		R	F	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	I	M	V	Q	G	N	.	.	.	.	.	T	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M	K
Query Conservation																																			.	.	.	.	.
Alig confidence		.	.	.	.	.																													.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	A	G	L	I	I	G	K	G	G	A	T	V	K	A	I	X	E	Q	S	G	A	W	V	Q	L	S	Q	K	P	L	Q	N	R	V	V	T	V	S	G	E	P	E	Q	N	R	K	A	V	E	L	I	I	Q	K	I	Q
Template Known Secondary structure		.	.	.	.	.							G	G	G										S	S																			S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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