Job Description Q13601 Confidence 97.66% Date Wed May 9 17:52:34 BST 2012 Rank 11 Aligned Residues 111 % Identity 21% Template c1j4wA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:fuse binding protein; PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene Resolution UNK

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	K	A	L	N	E	H	H	V	N	A	T	L	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	P	D	D	G	T	T	P	E	R	I	A	Q	I	T	G	P	P	D	R	A	Q	H	A	A	E	I	I	T	D	L	L	R	.	.	.	.	.	.	.	.	.	.	.	.	S	V	Q	Q	E	F	N	F	I	V	P	T	G	K	.	.	.	.	.	.	.
Template Known Secondary structure																			T	T	S		S																										.	.	.	.	.	.	.	.	.	.	.	.												T	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.													.	.	.	.	.	.	.	.	80	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.											190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	I	M	V	Q	G	N	T	.	.	.	.	.	.	.	.	.	.	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	G	L	I	I	G	K	G	G	E	T	I	K	S	I	S	Q	Q	S	G	A	R	I	E	L	Q	R	N	P	P	P	N	A	D	P	N	M	K	L	F	T	I	R	G	T	P	Q	Q	I	D	Y	A	R	Q	L	I	E	E	K	I
Template Known Secondary structure		.	.							G	G	G																					T	T	T	S		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions