Job Description Q13601 Confidence 46.75% Date Wed May 9 17:52:34 BST 2012 Rank 53 Aligned Residues 71 % Identity 21% Template c1hh2P_ PDB info PDB header:transcription regulation Chain: P: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima Resolution 2.1 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	.	.	.	.	.	.	R	A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	A	S	N	D	P	N	V	D	P	I	G	A	C	I	G	E	G	G	S	R	I	A	A	I	L	K	E	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	L	D	V	L	K	W	S	D	D	P	K	Q	L	I	A	N	A	L	A	P	A	T	V	I	E	V	E
Template Known Secondary structure								S	S	T	T	S									T	T	S	T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										S	S									T		S	S			S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.																		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
																		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	I	M	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	D	K	E	N	K	A	A	R	V	L	V	P	P	T	Q	L	S	L	A	I	G	K	G	G	Q	N	A	R	L	A	A	K	L	T	G	W	K	I	D	I
Template Known Secondary structure					T	T	T	T								T	T	S							G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions