Return to main results Retrieve Phyre Job Id

Job DescriptionP27986
Confidence100.00%DateTue Apr 3 14:59:12 BST 2012
Rank4Aligned Residues184
% Identity100%Templated1pbwa_
SCOP infoGTPase activation domain, GAP GTPase activation domain, GAP BCR-homology GTPase activation domain (BH-domain)
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLP
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Template Sequence  LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLP
Template Known Secondary structure 




TTS
S
TT
TTTTSS

S

TTS
SSSS


GGGS
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   195....200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  NPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFR
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Template Sequence  NPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFR
Template Known Secondary structure  S
SS
GGG

ST
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T
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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   275....280.........290........
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Query Sequence  FSAASSDNTENLIKVIEILISTEW
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Template Sequence  FSAASSDNTENLIKVIEILISTEW
Template Known Secondary structure 
SS

TT
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   275....280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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