Return to main results Retrieve Phyre Job Id

Job DescriptionP27986
Confidence100.00%DateTue Apr 3 14:59:12 BST 2012
Rank20Aligned Residues174
% Identity22%Templated1f7ca_
SCOP infoGTPase activation domain, GAP GTPase activation domain, GAP BCR-homology GTPase activation domain (BH-domain)
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150..... ....160.........170.........180.........190.........200.......
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Query Sequence  PPLLIKLVEAIEKKGLECSTLYRTQSS. SNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMI
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Template Sequence  FSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPET. EICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFI
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TT
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TTS
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TT
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   198.200.........210.........220.........230.........240 .........250.........260.........270......
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  SLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLI
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Template Sequence  KAAKLENQESRVSEIHSLVH. . . RLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPTVAAIMDIKFQN
Template Known Secondary structure  T
SST...TS
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SGGGG
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   283......290.........300.. .......310.........320.........330.........340.........350.........
 
   288.290.........300......
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Query Sequence  KVIEILISTEWNERQPAPA
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Template Sequence  IVIEILIENHEKIFNTVPE
Template Known Secondary structure  TS


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   363......370.........380.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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