Job Description P27986 Confidence 100.00% Date Tue Apr 3 14:59:12 BST 2012 Rank 22 Aligned Residues 185 % Identity 21% Template c3msxB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:rho gtpase-activating protein 20; PDBTitle: crystal structure of rhoa.gdp.mgf3 in complex with gap domain of2 arhgap20 Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		A	L	T	L	P	D	L	A	E	Q	F	A	P	P	D	I	A	P	P	L	L	I	K	L	V	E	A	I	E	K	K	G	L	E	C	S	T	L	Y	R	T	Q	S	S	.	S	N	L	A	E	L	R	Q	L	L	D	C	D	T	P	S	V	D	L	E	M	I	D	V	H	V	L	A	D	A	F	K	R	Y	L
Query Conservation																																														.
Alig confidence											.																																			.															.
Template Conservation											.																																																		.
Template Sequence		Q	L	F	G	I	S	L	P	N	.	I	C	E	N	D	N	L	P	K	P	V	L	D	M	L	F	F	L	N	Q	K	G	P	L	T	K	G	I	F	R	Q	S	A	N	V	K	S	C	R	E	L	K	E	K	L	N	S	G	V	.	E	V	H	L	D	C	E	S	I	F	V	I	A	S	V	L	K	D	F	L
Template Known Secondary structure				T	T	S					.		S	G	G	G																	G	G	G	S	T	T	T	T	T	S																	T		.				T	T	S	S
Template Predicted Secondary structure											.																																																		.
Template SS confidence
		361	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	P	N	P	V	I	P	A	A	V	Y	S	E	M	I	S	L	A	P	E	V	Q	S	S	E	E	Y	I	Q	L	L	K	K	L	I	R	S	P	S	I	P	H	Q	Y	W	L	T	L	Q	Y	L	L	K	H	F	F	K	L	S	Q	T	S	S	K	N	L	L	N	A	R	V	L	S	E	I	F	S	P
Query Conservation
Alig confidence																																								.	.	.
Template Conservation																																								.	.	.
Template Sequence		R	N	I	P	G	S	I	F	S	S	D	L	Y	D	H	W	V	S	V	M	D	Q	G	N	D	E	E	K	I	N	T	V	Q	R	L	L	D	Q	.	.	.	L	P	R	A	N	V	V	L	L	R	Y	L	F	G	V	L	H	N	I	E	Q	H	S	S	S	N	Q	M	T	A	F	N	L	A	V	C	V	A	P
Template Known Secondary structure			T	S	T	T	T	T	T	T	G	G	G							G	G	G	S	S	S													T	T	.	.	.	S																				T	T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		M	L	F	R	F	S	A	A	S	S	.	.	.	.	.	D	N	T	E	N	L	I	K	V	I	E	I	L	I	S	T	E	W	N	E	R
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		S	I	L	W	P	P	A	S	S	S	P	E	L	E	N	E	F	T	K	K	V	S	L	L	I	Q	F	L	I	E	N	C	L	R	I	F
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions