 |
| Job Description | P27986 | | Confidence | 99.84% | Date | Tue Apr 3 14:59:12 BST 2012 |
| Rank | 94 | Aligned Residues | 83 |
| % Identity | 16% | Template | c3mazA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:signal-transducing adaptor protein 1; |
PDBTitle: crystal structure of the human brdg1/stap-1 sh2 domain in complex with2 the ntal ptyr136 peptide
|
| Resolution | 1.90 Å |
|
 |
|   |   |
620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | |
. | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | |
|
|
. | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | |
. | . | . | . | . | . | . | . | 690 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | E | K | T | W | N | V | G | S | S | N | R | N | K | A | E | N | L | L | . |
R | G | K | R | D | G | T | F | L | V | R | E | S | S | K | Q | G | C | Y | A | C | S | V | V | V | D | . |
. |
. |
G | E | V | K | H | C | V | I | N | K | T | A | T | G | Y | G | F | . |
A | E | P | Y | N | L | Y | S | S | L | K | E | L |
| Query Conservation |   |
  |   |   |   |
|   |
|
|   |
|   |
|   |
|
|
|   |
|
| . |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|
|
|   |   |   |   | . | . | . |   |   |
|   |
|   |   |
|   |   |   |   |   |
|
|   |
| . |   |   |   |   |   |   |   |   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
| Template Sequence |   |
N | P | M | P | A | C | F | Y | T | V | S | R | K | E | A | T | E | M | L | Q | K | N | P | S | L | G | N | M | I | L | R | P | G | S | D | S | R | N | Y | S | I | T | I | R | Q | E | I | D | I | P | R | I | K | H | Y | K | V | M | S | V | G | Q | N | Y | T | I | E | L | E | K | P | V | T | L | P | N | L | F | S | V |
| Template Known Secondary structure |   |
|
|
|
| T | T | B |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| G | G | G |
| S |  |  |  |  |  |
| T | T | S | S | S |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
| S | S | S |
|  |  |  | S | S |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
|   |
|   |   |
695 | . | . | . | . | 700 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | L | H | Y | Q | H | T | S |
| Query Conservation |   |
|   |
|
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |   |
|
| Template Sequence |   |
I | D | Y | F | V | K | E | T |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|   |   |
253 | . | . | . | . | . | . | 260 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|