Job Description P27986 Confidence 35.68% Date Tue Apr 3 14:59:12 BST 2012 Rank 384 Aligned Residues 44 % Identity 30% Template c3k6sB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-2; PDBTitle: structure of integrin alphaxbeta2 ectodomain Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.																										.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	C	V	I	N	K	T	A	T	G	Y	G	F	A	E	P	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	S	S	L	K	E	L	V	L	H	Y	Q	H	T	S	L	V	Q	H	N	D	S	L	N	V	T	L	A	Y	P	V	Y	A	Q	Q	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	V	F	A	T	D	D	G	F	H	F	A	G	D	G	K	L	G	A	I	L	T	P	N	D	G	R	C	H	L	E	D	N	L	Y	K	R	S	N	E	F	D	Y	P	S	V	G	Q	L	A	H	K	L	A	E	N	N	I	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	I	F	A	V	T	S
Template Known Secondary structure									S	S					T	T	G	G	G	G	G	T							S					S	S	S	B		S	S	G	G	G	S					G	G	G								T	T		.	.	.	.	.	.	.	.	.	.	.	.	B							G
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.													.	.	.	.	.	300	.	.
		724
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		303

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions