Job Description P27986 Confidence 100.00% Date Tue Apr 3 14:59:12 BST 2012 Rank 27 Aligned Residues 177 % Identity 19% Template c3eapD_ PDB info PDB header:hydrolase activator Chain: D: PDB Molecule:rho gtpase-activating protein 11a; PDBTitle: crystal structure of the rhogap domain of arhgap11a Resolution 2.30 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																							.	.	.	.																													.
Query SS confidence																							.	.	.	.																													.
Query Sequence		D	V	E	Q	Q	A	L	T	L	P	D	L	A	E	Q	F	A	P	P	D	I	.	.	.	.	A	P	P	L	L	I	K	L	V	E	A	I	E	K	K	G	L	E	C	S	T	L	Y	R	T	Q	S	S	.	S	N	L	A	E	L	R	Q	L	L	D	C	D	T	P	S	V	D	L	E	M	I	D	V	H	V
Query Conservation																							.	.	.	.																													.
Alig confidence																							.	.	.	.														.	.	.	.	.	.	.	.	.							.														.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		G	I	K	V	G	K	I	F	G	V	P	F	N	A	L	P	H	S	A	V	P	E	Y	G	H	I	P	S	F	L	V	D	A	C	T	S	L	E	.	.	.	.	.	.	.	.	.	D	H	I	H	T	S	V	I	R	L	K	A	L	K	N	K	V	D	H	G	.	.	.	.	.	.	.	.	.	P	P	C	D
Template Known Secondary structure								S	T	T			T	T	T	S						T	T	T																.	.	.	.	.	.	.	.	.	T	T	T	T																	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.										.	.	80	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	A	F	K	R	Y	L	L	D	L	P	N	P	V	I	P	A	A	V	Y	S	E	M	I	S	L	A	P	E	V	Q	S	S	E	E	Y	I	Q	L	L	K	K	L	I	R	S	P	S	I	P	H	Q	Y	W	L	T	L	Q	Y	L	L	K	H	F	F	K	L	S	Q	T	S	S	K	N	L	L	N	A
Query Conservation
Alig confidence																																				.	.												.	.
Template Conservation																																				.	.												.	.
Template Sequence		I	A	G	L	L	K	Q	F	F	R	E	L	P	E	P	I	L	P	A	D	L	H	E	A	L	L	K	A	Q	Q	L	G	T	E	.	.	E	K	N	K	A	T	L	L	L	S	C	.	.	L	L	A	D	H	T	V	H	V	L	R	Y	F	F	N	F	L	R	N	V	S	L	R	S	S	E	N	K	M	D	S
Template Known Secondary structure												T	S	S	S		S	S		G	G	G									T	S		T	T	.	.											T	.	.	T	S																					T
Template Predicted Secondary structure																																				.	.												.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	S	E	I	F	S	P	M	L	F	R	F	S	A	A	S	S	D	N	T	E	N	L	I	K	V	I	E	I	L	I	S	T	E	W	N	E	R	Q	P	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	L	A	V	I	F	A	P	N	L	L	Q	T	S	S	N	T	E	K	K	L	R	L	Q	A	A	V	V	Q	T	L	I	D	Y	A	S	D	I	G	R	V	P	D
Template Known Secondary structure														T																						T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions