Job Description P27986 Confidence 98.37% Date Tue Apr 3 14:59:12 BST 2012 Rank 209 Aligned Residues 55 % Identity 40% Template c2x3wD_ PDB info PDB header:endocytosis Chain: D: PDB Molecule:protein kinase c and casein kinase substrate in neurons PDBTitle: structure of mouse syndapin i (crystal form 2) Resolution 2.64 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		V	R	V	R	A	L	Y	D	Y	D	G	Q	E	Q	D	E	L	S	F	K	A	G	D	E	L	T	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	D	E	Q	G	W	C	R	G	R	L	D	S	G	Q	L	.	G	L	Y	P	A	N	Y	V	E
Template Known Secondary structure								S		B			S	S	S	S	B			B		T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S							S	S				.					G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.															.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions