Job Description P27986 Confidence 98.07% Date Tue Apr 3 14:59:12 BST 2012 Rank 287 Aligned Residues 57 % Identity 33% Template c2vknA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2 Resolution 2.05 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	.	.	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R
Query Conservation																	.	.
Alig confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		Y	K	A	K	A	L	Y	P	Y	D	A	D	D	D	D	A	Y	E	I	S	F	E	Q	N	E	I	L	Q	V	S	D	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	W	W	K	A	R	.	.	R	A	N	G	E	T	G	I	I	P	S	N	Y	V	Q	L	I	D	G
Template Known Secondary structure							S	S		B				S	S	S	T	T	B			B		T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						.	.		T	T	S							G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions