Job Description P27986 Confidence 100.00% Date Tue Apr 3 14:59:12 BST 2012 Rank 18 Aligned Residues 178 % Identity 21% Template c2ovjA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rac gtpase-activating protein 1; PDBTitle: the crystal structure of the human rac gtpase activating protein 12 (racgap1) mgcracgap. Resolution 1.49 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																													.																							.
Query SS confidence																.	.																													.																							.
Query Sequence		T	L	P	D	L	A	E	Q	F	A	P	P	D	I	.	.	A	P	P	L	L	I	K	L	V	E	A	I	E	K	K	G	L	E	C	S	T	L	Y	R	T	Q	S	S	.	S	N	L	A	E	L	R	Q	L	L	D	C	D	T	P	S	V	D	L	E	M	I	.	D	V	H	V	L	A	D	A	F	K	R	Y
Query Conservation																.	.																													.																							.
Alig confidence																.	.																													.																							.
Template Conservation
Template Sequence		S	M	E	G	M	L	A	D	F	V	S	Q	T	S	P	M	I	P	S	I	V	V	H	C	V	N	E	I	E	Q	R	G	L	T	E	T	G	L	Y	R	I	S	G	C	D	R	T	V	K	E	L	K	E	K	F	L	R	V	K	T	V	P	L	L	S	K	V	D	D	I	H	A	I	C	S	L	L	K	D	F
Template Known Secondary structure							G	G	G	G			S	S	S	S																	T	T	T	S	T	T	T	T	T	S																T	T		S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	L	P	N	P	V	I	P	A	A	V	Y	S	E	M	I	S	L	A	P	E	V	Q	S	S	E	E	Y	I	Q	L	L	K	K	L	I	R	S	P	S	I	P	H	Q	Y	W	L	T	L	Q	Y	L	L	K	H	F	F	K	L	S	Q	T	S	S	K	N	L	L	N	A	R	V	L	S	E	I	F	S
Query Conservation
Alig confidence																																								.	.	.																							.
Template Conservation																																								.	.	.																							.
Template Sequence		L	R	N	L	K	E	P	L	L	T	F	R	L	N	R	A	F	M	E	A	A	E	I	T	D	E	D	N	S	I	A	A	M	Y	Q	A	V	G	.	.	.	E	L	P	Q	A	N	R	D	T	L	A	F	L	M	I	H	L	Q	R	V	A	Q	.	S	P	H	T	K	M	D	V	A	N	L	A	K	V	F	G
Template Known Secondary structure				T	S	S	S		T	T		T	T	T											S	S														.	.	.	T	S																					.		T	T	S
Template Predicted Secondary structure																																								.	.	.																							.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.				.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.							.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		P	M	L	F	R	F	S	A	A	S	S	D	N	T	.	.	.	.	.	.	E	N	L	I	K	V	I	E	I	L	I	S
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	I	V	A	H	A	V	P	N	P	D	P	V	T	M	L	Q	D	I	K	R	Q	P	K	V	V	E	R	L	L	S
Template Known Secondary structure					T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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