Job Description P27986 Confidence 100.00% Date Tue Apr 3 14:59:12 BST 2012 Rank 23 Aligned Residues 191 % Identity 16% Template c2ngrB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein (gtpase activating protein (rhg)); PDBTitle: transition state complex for gtp hydrolysis by cdc42:2 comparisons of the high resolution structures for cdc423 bound to the active and catalytically compromised forms of4 the cdc42-gap. Resolution 1.90 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		D	V	E	Q	Q	A	L	T	L	P	D	L	A	E	Q	F	A	P	P	D	I	A	P	P	L	L	I	K	L	V	E	A	I	E	K	K	G	L	E	C	S	T	L	Y	R	T	Q	S	S	.	S	N	L	A	E	L	R	Q	L	L	D	C	D	T	P	S	V	D	L	E	M	I	D	V	H	V	L	A	D	A
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		P	N	Q	Q	F	G	V	S	L	Q	H	L	Q	E	K	N	P	E	Q	E	P	I	P	I	V	L	R	E	T	V	A	Y	L	Q	A	H	A	L	T	T	E	G	I	F	A	R	S	A	N	T	Q	V	V	R	E	V	Q	Q	K	Y	N	M	G	L	P	V	D	F	D	Q	Y	N	E	L	H	L	P	A	V	I
Template Known Secondary structure		T	T			S	S									T		S	S			S	S																T	T		T	T	T	T	T	S																T	T					T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	R	Y	L	L	D	L	P	N	P	V	I	P	A	A	V	Y	S	E	M	I	S	L	A	P	E	V	Q	S	S	E	E	Y	I	Q	L	L	K	K	L	I	R	S	P	S	I	P	H	Q	Y	W	L	T	L	Q	Y	L	L	K	H	F	F	K	L	S	Q	T	S	S	K	N	L	L	N	A	R	V	L	S
Query Conservation
Alig confidence																													.	.															.	.
Template Conservation																													.	.															.	.
Template Sequence		L	K	T	F	L	R	E	L	P	E	P	L	L	T	F	D	L	Y	P	H	V	V	G	F	L	N	I	.	.	D	E	S	Q	R	V	P	A	T	L	Q	V	L	Q	.	.	T	L	P	E	E	N	Y	Q	V	L	R	F	L	T	A	F	L	V	Q	I	S	A	H	S	D	Q	N	K	M	T	N	T	N	L	A
Template Known Secondary structure								T	S	S	S		T	T		G	G	G						T	G	G	G	S	.	.		G	G	G										T	.	.	T	S																					T
Template Predicted Secondary structure																													.	.															.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		E	I	F	S	P	M	L	F	R	F	S	A	A	S	S	D	.	.	N	T	E	N	L	I	K	V	I	E	I	L	I	S	T	E	W	N	E	R
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		V	V	F	G	P	N	L	L	W	A	K	D	A	A	I	T	L	K	A	I	N	P	I	N	T	F	T	K	F	L	L	D	H	Q	G	E	L	F
Template Known Secondary structure												S	S																					T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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