Job Description P27986 Confidence 99.91% Date Tue Apr 3 14:59:12 BST 2012 Rank 40 Aligned Residues 98 % Identity 36% Template c2lctA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.		.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		D	E	K	T	W	N	V	G	S	S	N	R	N	K	A	E	N	L	L	R	G	K	R	D	G	T	F	L	V	R	E	S	S	K	.	Q	G	C	Y	A	C	S	V	V	V	D	G	E	V	K	H	C	V	I	N	K	T	A	T	G	Y	G	F	A	E	P	Y	N	L	Y	S	S	L	K	E	L	V	L	H	Y
Query Conservation																																				.
Alig confidence																																				.																													.
Template Conservation																																																																	.
Template Sequence		S	V	H	L	W	Y	A	G	P	M	E	R	A	G	A	E	S	I	L	A	N	R	S	D	G	T	F	L	V	R	Q	R	V	K	D	A	A	E	F	A	I	S	I	K	Y	N	V	E	V	K	H	I	K	I	M	T	A	E	G	L	Y	R	I	.	T	E	K	K	A	F	R	G	L	T	E	L	V	E	F	Y
Template Known Secondary structure		T	T	S	S	S				S													S		T	T	B								S	S	S		S								S	S	S										T	T				S	.	S	S	S	S			S	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	T	S	L	V	Q	H	N	D	S	L	N	V	T	L	A	Y	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	N	S	L	K	D	C	F	K	S	L	D	T	T	L	Q	F	P	F
Template Known Secondary structure		T	T	S						S	S	S							B		S
Template Predicted Secondary structure
Template SS confidence
		746	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions