Job Description P27986 Confidence 98.56% Date Tue Apr 3 14:59:12 BST 2012 Rank 148 Aligned Residues 60 % Identity 28% Template c2ke9A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:caskin-2; PDBTitle: nmr solution structure of the caskin sh3 domain Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.																																									.	.	.	.
Query SS confidence															.																																									.	.	.	.
Query Sequence		Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	.	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	.	.	.	.	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R	K
Query Conservation															.																																									.	.	.	.
Alig confidence															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	R	A	L	K	D	F	W	N	L	H	D	P	T	A	L	N	V	R	A	G	D	V	I	T	V	L	E	Q	H	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	W	K	G	H	I	H	E	S	Q	R	G	T	D	R	I	G	Y	F	P	P	G	I	V	E	V	V	S	K	R
Template Known Secondary structure							S	S		B				S		T	T	B			B		T	T						S		S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	S	T	T	S								G	G	G			S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.																.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions