Job Description P27986 Confidence 98.29% Date Tue Apr 3 14:59:12 BST 2012 Rank 237 Aligned Residues 57 % Identity 30% Template c2k6dA_ PDB info PDB header:sh3 domain/ubiquitin Chain: A: PDB Molecule:sh3 domain-containing kinase-binding protein 1; PDBTitle: cin85 sh3-c domain in complex with ubiquitin Resolution UNK

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		C	K	V	I	F	P	Y	E	A	Q	N	D	D	E	L	T	I	K	E	G	D	I	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	K	D	C	I	D	V	G	W	W	E	G	.	.	E	L	N	G	R	R	G	V	F	P	D	N	F	V	K	L	L	P	P
Template Known Secondary structure					S	S							S	S	B					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	T	T					.	.			T	T							G	G	G	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.														.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions