Job Description P27986 Confidence 98.07% Date Tue Apr 3 14:59:12 BST 2012 Rank 286 Aligned Residues 70 % Identity 23% Template c2jw4A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: nmr solution structure of the n-terminal sh3 domain of2 human nckalpha Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	A	E	G	Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R	K
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		T	M	A	E	E	V	V	V	V	A	K	F	D	Y	V	A	Q	Q	E	Q	E	L	D	I	K	K	N	E	R	L	W	L	L	D	D	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	W	R	V	R	N	S	M	N	K	.	T	G	F	V	P	S	N	Y	V	E	R	K	N	S	A
Template Known Secondary structure			S	S								S	S					S	S	T	T	S					T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						T	T	S		.						T	T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		81	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	S	P	P	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	A	N	S	S
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions