Job Description P27986 Confidence 98.47% Date Tue Apr 3 14:59:12 BST 2012 Rank 169 Aligned Residues 57 % Identity 39% Template c2j6kE_ PDB info PDB header:protein binding Chain: E: PDB Molecule:cd2-associated protein; PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog) Resolution 2.78 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		V	D	Y	I	V	E	Y	D	Y	D	A	V	H	D	D	E	L	T	I	R	V	G	E	I	I	R	N	V	K	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	E	G	W	L	E	G	.	.	E	L	N	G	R	R	G	M	F	P	D	N	F	V	K	E	I	K
Template Known Secondary structure								S		B			S	S	T	T	B			B		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T					.	.			T	T							G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.															.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions