Job Description P27986 Confidence 97.87% Date Tue Apr 3 14:59:12 BST 2012 Rank 302 Aligned Residues 60 % Identity 20% Template c2dx1A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef Resolution 2.36 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R	K	K	I	S	P	P
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		E	A	L	W	D	H	V	T	X	D	D	Q	E	L	G	F	K	A	G	D	V	I	E	V	X	D	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	E	W	W	W	G	.	.	R	V	A	D	G	E	G	W	F	P	A	S	F	V	R	L	R	V	N	Q	D	A	Q	S	S
Template Known Secondary structure				S	S		B					T	T	B			B		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S					.	.			S	S							G	G	G					S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions