Job Description P27986 Confidence 98.45% Date Tue Apr 3 14:59:12 BST 2012 Rank 180 Aligned Residues 71 % Identity 25% Template c2cubA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1 Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R	K	K	I	S	P	P
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		M	P	A	Y	V	K	F	N	Y	M	A	E	R	E	D	E	L	S	L	I	K	G	T	K	V	I	V	M	E	K	C	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	W	R	G	.	.	S	Y	N	G	Q	V	G	W	F	P	S	N	Y	V	T	E	E	G	D	S	P	L	G	D	H
Template Known Secondary structure							S	S						S	T	T	B					T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					.	.			T	T							G	G	G									S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		86	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	K	P	R	P	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	S	G	P	S	S	G
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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