Job Description P27986 Confidence 100.00% Date Tue Apr 3 14:59:12 BST 2012 Rank 1 Aligned Residues 240 % Identity 22% Template c1xa6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:beta2-chimaerin; PDBTitle: crystal structure of the human beta2-chimaerin Resolution 3.20 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																					.																											.	.																				.
Query SS confidence																					.																											.	.																				.
Query Sequence		Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	.	G	R	K	K	I	S	P	P	T	P	K	P	R	P	P	R	P	L	P	V	A	P	G	S	S	K	.	.	T	E	A	D	V	E	Q	Q	A	L	T	L	P	D	L	A	E	Q	F	.	A	P	P	D	I	A	P	P	L	L	I	K
Query Conservation																					.																											.	.																				.
Alig confidence																					.																											.	.																				.
Template Conservation
Template Sequence		F	K	V	H	T	F	R	G	P	H	W	C	E	Y	C	A	N	F	M	W	G	L	I	A	Q	G	V	R	C	S	D	C	G	L	N	V	H	K	Q	C	S	K	H	V	P	N	D	C	Q	P	D	L	K	R	I	K	K	V	Y	C	C	D	L	T	T	L	V	K	A	H	N	T	Q	R	P	M	V	V	D	I
Template Known Secondary structure								S	S			B		T	T	T			B			T	T	T	T						S	S	S				B		T	G	G	G	T	T	S		S				T	T	T	T	S					T	T	S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																							.																							.	.	.
Query SS confidence																							.																							.	.	.
Query Sequence		L	V	E	A	I	E	K	K	G	L	E	C	S	T	L	Y	R	T	Q	S	S	.	S	N	L	A	E	L	R	Q	L	L	D	C	D	T	P	S	V	D	L	E	M	I	.	.	.	D	V	H	V	L	A	D	A	F	K	R	Y	L	L	D	L	P	N	P	V	I	P	A	A	V	Y	S	E	M	I	S	L	A
Query Conservation																							.																							.	.	.
Alig confidence																							.																							.	.	.
Template Conservation
Template Sequence		C	I	R	E	I	E	A	R	G	L	K	S	E	G	L	Y	R	V	S	G	F	T	E	H	I	E	D	V	K	M	A	F	D	R	D	G	E	K	A	D	I	S	A	N	V	Y	P	D	I	N	I	I	T	G	A	L	K	L	Y	F	R	D	L	P	I	P	V	I	T	Y	D	T	Y	S	K	F	I	D	A	A
Template Known Secondary structure									S		S	S	S	T	T	T	T	T	S															S	S	T	T	T	T	S				S	S	S	S			T															S	S		T	T		S	T	T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		P	E	V	Q	S	S	E	E	Y	I	Q	L	L	K	K	L	I	R	S	P	S	I	P	H	Q	Y	W	L	T	L	Q	Y	L	L	K	H	F	F	K	L	S	Q	T	S	S	K	N	L	L	N	A	R	V	L	S	E	I	F	S	P	M	L	F	R	F	S	A	A	S	S	.	.	.	.	D	N	T	E	N	L
Query Conservation																																																																								.	.	.	.
Alig confidence																			.	.	.																																																			.	.	.	.
Template Conservation																			.	.	.
Template Sequence		K	I	S	N	A	D	E	R	L	E	A	V	H	E	V	L	M	.	.	.	L	L	P	P	A	H	Y	E	T	L	R	Y	L	M	I	H	L	K	K	V	T	M	N	E	K	D	N	F	M	N	A	E	N	L	G	I	V	F	G	P	T	L	M	R	P	P	E	D	S	T	L	T	T	L	H	D	M	R	Y	Q
Template Known Secondary structure		T																T	.	.	.	T	S											T	T	T	T	T					T	T	T	T	T	S												T	T	T	S						S		T	T	G	G	G	G	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.				.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	V	I	E	I	L	I	S	T	E	W	N	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	I	V	Q	I	L	I	E	N	E	D	V	L	F
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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