Job Description P27986 Confidence 97.89% Date Tue Apr 3 14:59:12 BST 2012 Rank 299 Aligned Residues 63 % Identity 19% Template c1u3oA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:huntingtin-associated protein-interacting PDBTitle: solution structure of rat kalirin n-terminal sh3 domain Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		S	A	E	G	Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	.	.	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I
Query Conservation																																																											.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	G	C	E	L	T	V	V	L	Q	D	F	S	A	A	H	S	S	E	L	S	I	Q	V	G	Q	T	V	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	P	S	E	R	P	G	W	C	L	V	R	T	T	E	R	S	P	P	Q	E	G	L	V	P	S	S	T	L	C	I	S
Template Known Secondary structure											S	S		B				S	T	T				B		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T	S	S	T	T							S	S	S	S	S								G	G	G	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions