Job Description P27986 Confidence 98.77% Date Tue Apr 3 14:59:12 BST 2012 Rank 126 Aligned Residues 67 % Identity 27% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.
Query Sequence		M	S	A	E	G	Y	Q	Y	R	A	L	Y	D	Y	K	K	E	R	E	E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	.	.	.	.	.	.	.	.	E	T	T	G	E	R	G	D	F	P	G	T
Query Conservation																																																														.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	.	.	.	.	.	.	.	.	.	.	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N
Template Known Secondary structure			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	.	.	.	.	.	.	.	.	.	.	S		T	T												T	G	G	G	G	G	G	T						S	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.											.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		73	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	E	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	E	R	V
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions