Job Description P27986 Confidence 22.45% Date Tue Apr 3 14:59:12 BST 2012 Rank 396 Aligned Residues 87 % Identity 21% Template c1dgsB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis Resolution 2.90 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	D	L	H	L	G	D	I	L	T	V	N	K	G	S	L	V	A	L	G	F	S	D	G	Q	E	A	R	P	E	E	I	G	W	L	N	G	Y	N	E	T	T	G	E	R	G	D	F	P	G	T	Y	V	E	Y	I	G	R	K	K	I	S	P	P	T	P	K	P	R	P	P	R	P	L	P	V	A	P
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		E	E	L	D	I	R	I	G	D	W	V	L	V	H	K	.	.	.	.	.	.	.	.	.	.	A	G	G	V	I	P	E	V	L	R	V	L	K	E	.	.	R	R	T	G	K	E	R	P	I	.	.	.	.	.	.	.	.	.	.	.	R	W	P	E	A	C	P	E	C	G	H	R	.	.	.	.	.	.	.
Template Known Secondary structure				T	T		B	S	S								.	.	.	.	.	.	.	.	.	.		T	T	T									G	G	.	.	G			S				B		.	.	.	.	.	.	.	.	.	.	.				S	B		T	T	T			B	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		2363	.	.	.	.	.	.	2370	.	.	.	.	.	.	.											.	.	2380	.	.	.	.	.	.	.	.	.	2390	.			.	.	.	.	.	.	.	.	2400												.	.	.	.	.	.	.	.	.	2410	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	S	K	T	E	A	D	V	E	Q	Q	A	L	T	L	P	D	L	A	E	Q	F	A	P	P	D	I	A	P	P	L	L	I	K	L	V	E	A	I	E	K	K	G	L	E	C	S	T	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	K	E	G	K	V	H	R	C	P	N	P	L	C	P	A	K	R	F	E	A	I	R	H	Y	A	S	R	K	A	M	D	I	E	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T							T	T		G	G	G										S	T	T	T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															2413	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions