Job Description O15350 Confidence 97.85% Date Thu Apr 26 09:24:59 BST 2012 Rank 33 Aligned Residues 75 % Identity 15% Template c2fe9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein vts1; PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna Resolution UNK

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		479	480	.	.	.	.	.	.	.	.	.	490	.					.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure															.	.	.	.																																											.
Query SS confidence															.	.	.	.																																											.
Query Sequence		S	H	C	T	P	P	P	P	Y	H	A	D	P	.	.	.	.	S	L	V	S	F	L	T	G	L	G	C	P	N	C	I	E	Y	F	T	S	Q	G	L	Q	S	I	Y	H	L	Q	N	L	T	I	E	D	L	G	A	L	K	I	.	P	E	Q	Y	R	M	T	I	W	R	G	L	Q	D	L	K	Q	G	H	D
Query Conservation															.	.	.	.																																											.
Alig confidence															.	.	.	.																								.	.	.																	.
Template Conservation																																										.	.	.
Template Sequence		S	N	S	S	M	N	P	K	S	L	T	D	P	K	L	L	K	N	I	P	M	W	L	K	S	L	R	L	H	K	Y	S	D	A	L	S	G	T	P	W	.	.	.	I	E	L	I	Y	L	D	D	E	T	L	E	K	K	G	V	L	A	L	G	A	R	R	K	L	L	K	A	F	G	I	V	I	D	Y	K	E
Template Known Secondary structure								T	T	T	T	T							T							T	T	T		G	G	G						T	S			.	.	.				T	T										T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		554	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	L
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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