Phyre 2 alignment of O15350 with c2e8oA

Job Description O15350
Confidence 93.71% Date Thu Apr 26 09:24:59 BST 2012

Rank 67 Aligned Residues 63

% Identity 19% Template c2e8oA_

PDB info PDB header:signaling protein Chain: A: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: solution structure of the n-terminal sam-domain of the sam2 domain and hd domain containing protein 1 (dendritic cell-3 derived ifng-induced protein) (dcip) (monocyte protein 5)4 (mop-5)

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	493	.	.	.	.	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure													.	.																														.
Query SS confidence													.	.																														.
Query Sequence	L	V	S	F	L	T	G	L	G	C	P	N	.	.	C	I	E	Y	F	T	S	Q	G	L	Q	S	I	Y	H	L	Q	N	L	T	I	E	D	L	G	A	L	K	I	.	P	E	Q	Y	R	M	T	I	W	R	G	L	Q	D	L	K	Q	G	H	D	Y	S	T
Query Conservation													.	.																														.
Alig confidence													.	.											.																			.
Template Conservation																									.
Template Sequence	V	C	S	F	L	R	R	G	G	F	E	E	P	V	L	L	K	N	I	R	E	N	E	I	.	T	G	A	L	L	P	C	L	D	E	S	R	F	E	N	L	G	V	S	S	L	G	E	R	K	K	L	L	S	Y	I	Q	R	L	V	Q	I	H	V	D	T	M
Template Known Secondary structure									T													T	T		.		T	T	T	T	T	T									T	T																			T	T	T	T		S	S
Template Predicted Secondary structure																									.
Template SS confidence
	35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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