Job Description O15350 Confidence 97.39% Date Thu Apr 26 09:24:59 BST 2012 Rank 50 Aligned Residues 55 % Identity 13% Template c2b6gA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	V	S	F	L	T	G	L	G	C	P	N	C	I	E	Y	F	T	S	Q	G	L	Q	S	I	Y	H	L	Q	N	L	T	I	E	D	L	G	A	L	K	I	.	P	E	Q	Y	R	M	T	I	W	R	G	L	Q	D	L	K	Q
Query Conservation																																											.
Alig confidence																								.	.	.																	.
Template Conservation																								.	.	.
Template Sequence		I	P	M	W	L	K	S	L	R	L	H	K	Y	S	D	A	L	S	G	T	P	W	.	.	.	I	E	L	I	Y	L	D	D	E	T	L	E	K	K	G	V	L	A	L	G	A	R	R	K	L	L	K	A	F	G	I	V	I	D
Template Known Secondary structure										T									T	T	S			.	.	.				T	T										S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.				.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions