Job Description A0FGR8 Confidence 99.85% Date Sat Jun 16 10:27:15 BST 2012 Rank 27 Aligned Residues 120 % Identity 31% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.							.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		P	V	P	K	G	V	L	R	I	H	F	I	E	A	Q	D	L	Q	G	K	D	T	Y	L	K	G	L	V	K	G	K	S	D	P	Y	G	I	I	R	V	G	N	.	.	.	.	.	.	Q	I	F	Q	S	R	V	I	K	E	N	L	S	P	K	W	N	E	V	Y	E	A	L	V	Y	E	H	P	G	Q	E	L
Query Conservation																																												.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.															.	.	.	.	.	.																												.
Template Conservation																					.	.	.	.	.	.	.	.	.																																																.
Template Sequence		N	D	D	T	R	V	V	R	V	K	V	I	A	G	I	G	L	A	I	.	.	.	.	.	.	.	.	.	L	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	E	E	I	L	F	R	V	L	P	Q	.	R	H	R	I
Template Known Secondary structure			T	T													S				.	.	.	.	.	.	.	.	.															T	T	T												S	S		S	S													T	T	.	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.						.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		E	I	E	L	F	D	E	D	P	D	K	D	D	F	L	G	S	L	M	I	D	L	I	E	V	E	K	E	R	L	L	D	E	W	F	T	L	D	E	V	P	.	.	.	.	.	K	G	K	L	H	L	R	L	E	W	L	T	L	M	P	N	A	S
Query Conservation																																											.	.	.	.	.
Alig confidence										.	.	.																															.	.	.	.	.
Template Conservation										.	.	.
Template Sequence		L	F	E	V	F	D	E	N	.	.	.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L	R	L	K	M	T	Y	L	P	T	H	L	P	H	P
Template Known Secondary structure										.	.	.											S		S			B											B		S	S	T	T					S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions