Job Description A0FGR8 Confidence 8.35% Date Sat Jun 16 10:27:15 BST 2012 Rank 99 Aligned Residues 88 % Identity 19% Template c3h4zC_ PDB info PDB header:allergen Chain: C: PDB Molecule:maltose-binding periplasmic protein fused with allergen PDBTitle: crystal structure of an mbp-der p 7 fusion protein Resolution 2.35 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.											.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																				.											.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																																				.											.
Query Sequence		I	S	F	V	G	N	C	E	I	D	L	E	I	K	R	Y	F	C	R	A	G	V	K	.	.	.	.	.	.	.	.	.	.	S	I	Q	I	H	G	T	M	R	V	I	L	E	P	L	I	G	D	M	P	L	V	G	A	L	S	I	F	F	L	R	K	P	L	L	.	E	I	N	W	T	G	L	T	N	L	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.																																				.											.
Alig confidence																									.	.	.	.	.	.	.	.	.	.														.	.																					.											.
Template Conservation																																																.	.
Template Sequence		M	K	R	V	G	D	A	N	V	K	S	E	D	G	V	V	K	A	H	L	L	V	G	V	H	D	D	V	V	S	M	E	Y	D	L	A	Y	K	P	N	T	H	V	I	S	D	.	.	I	Q	D	F	V	V	E	L	S	L	E	V	S	E	E	G	N	M	T	L	T	S	F	E	V	R	Q	F	A	N	V	V
Template Known Secondary structure						S								T	T												S	S																				.	.		S	S											T	T														S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.			1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.
										338	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.			.	.
Query SS confidence		.	.	.	.	.	.	.	.			.	.
Query Sequence		.	.	.	.	.	.	.	.	L	D	.	.	V	P	G	L	N	G	L	S	D	T	I	I	L	D	I	I	S	N	Y	L
Query Conservation		.	.	.	.	.	.	.	.			.	.
Alig confidence		.	.	.	.	.	.	.	.			.	.
Template Conservation
Template Sequence		N	H	I	G	G	L	S	I	L	D	P	I	F	A	V	L	S	D	V	L	T	A	I	F	Q	D	T	V	R	A	E	M
Template Known Secondary structure					T	T			T	T																T	T	T
Template Predicted Secondary structure
Template SS confidence
		1167	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions