Job Description A0FGR8 Confidence 99.74% Date Sat Jun 16 10:27:15 BST 2012 Rank 45 Aligned Residues 118 % Identity 34% Template c2nsqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4-like protein; PDBTitle: crystal structure of the c2 domain of the human e3 ubiquitin-protein2 ligase nedd4-like protein Resolution 1.85 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420								.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		R	F	P	V	P	K	G	V	L	R	I	H	F	I	E	A	Q	D	L	Q	G	K	D	T	Y	L	K	G	L	V	K	G	K	S	D	P	Y	G	I	I	R	V	.	.	.	.	.	.	.	G	N	Q	I	F	Q	S	R	V	I	K	E	N	L	S	P	K	W	N	E	V	Y	E	A	L	V	Y	E	H	P	G
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																													.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																																															.
Template Sequence		E	D	E	G	E	S	R	I	L	R	V	K	V	V	S	G	I	D	L	A	K	.	.	.	.	.	.	.	.	.	.	K	A	S	D	P	Y	V	K	L	S	L	Y	V	A	D	E	N	R	E	L	A	L	V	Q	T	K	T	I	K	K	T	L	N	P	K	W	N	E	E	F	Y	F	R	V	N	P	.	S	N
Template Known Secondary structure		S		T	T	T													S				.	.	.	.	.	.	.	.	.	.														T	T	T	T												S	S		S	S													T	.	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																															.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.
		452	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.						.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure														.																		.																	.	.	.	.	.
Query SS confidence														.																		.																	.	.	.	.	.
Query Sequence		Q	E	L	E	I	E	L	F	D	E	D	P	.	D	K	D	D	F	L	G	S	L	M	I	D	L	I	E	V	E	.	K	E	R	L	L	D	E	W	F	T	L	D	E	V	P	K	.	.	.	.	.	G	K	L	H	L	R	L	E	W	L	T
Query Conservation														.																		.																	.	.	.	.	.
Alig confidence														.																		.																	.	.	.	.	.
Template Conservation
Template Sequence		H	R	L	L	F	E	V	F	D	E	N	R	L	T	R	D	D	F	L	G	Q	V	D	V	P	L	S	H	L	P	T	E	D	P	Y	T	F	K	D	F	L	L	R	P	R	S	H	K	S	R	V	K	G	F	L	R	L	K	M	A	Y	M	P
Template Known Secondary structure													S	S	S													T	T			B												B		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions