Job Description A0FGR8 Confidence 99.85% Date Sat Jun 16 10:27:15 BST 2012 Rank 30 Aligned Residues 136 % Identity 29% Template c2cm6A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: crystal structure of the c2b domain of rabphilin3a Resolution 1.85 Å

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		773	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820		.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		L	R	Q	L	E	N	G	T	T	L	G	Q	S	P	L	G	Q	I	Q	L	T	I	R	H	S	S	Q	R	N	K	L	I	V	V	V	H	A	C	R	N	L	I	A	F	S	E	D	G	.	S	D	P	Y	V	R	M	Y	L	L	P	D	K	R	R	S	G	R	R	K	T	H	V	S	K	K	T	L	N	P	V
Query Conservation																																																		.
Alig confidence																																																		.															.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		M	A	L	Y	E	E	E	Q	V	E	R	I	E	E	R	G	K	I	L	V	S	L	M	Y	S	T	Q	Q	G	G	L	I	V	G	I	I	R	C	V	H	L	A	A	M	D	A	N	G	Y	S	D	P	F	V	K	L	W	L	K	P	K	K	A	.	.	.	K	H	K	T	Q	I	K	K	K	T	L	N	P	E
Template Known Secondary structure				T	G	G	G	G																			T	T	T	T											S					S	T	T	S														T	T	.	.	.									S		S	S
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.				.	.	.	590	.	.	.	.	.	.	.	.	.	600
		852	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900													.	.	.	.	.	.	.	.	.	910	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	Q	S	F	D	F	S	V	S	L	P	E	V	Q	R	R	T	L	D	V	A	V	K	N	S	G	G	F	L	S	K	D	K	G	L	L	G	K	V	L	V	A	L	A	S	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	A	K	G	W	T	Q	W	Y	D	L	T	E	D
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		F	N	E	E	F	F	Y	D	I	K	H	S	D	L	A	K	K	S	L	D	I	S	V	W	D	Y	D	I	G	K	.	.	S	N	D	Y	I	G	G	C	Q	L	G	I	S	A	K	G	E	R	L	K	H	W	Y	E	C	L	K	N	K	D	K	K	I	E	R	W	H	Q	L	Q	N	E
Template Known Secondary structure																T	T												S	S	S	.	.												T	T															S	T	T										B
Template Predicted Secondary structure																																.	.
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.			.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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