Job Description A0FGR8 Confidence 26.37% Date Sat Jun 16 10:27:15 BST 2012 Rank 72 Aligned Residues 119 % Identity 8% Template c1bp1A_ PDB info PDB header:bactericidal Chain: A: PDB Molecule:bactericidal/permeability-increasing protein; PDBTitle: crystal structure of bpi, the human bactericidal2 permeability-increasing protein Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		L	S	T	F	S	F	T	K	V	D	V	G	Q	Q	P	L	R	I	.	.	.	N	G	V	K	V	Y	T	E	N	V	D	K	R	Q	I	I	L	D	L	Q	I	S	F	V	G	N	C	E	I	D	L	E	I	K	R	Y	F	C	R	A	G	V	K	S	I	Q	I	H	G	T	M	R	V	I	L	E	P	L	I
Query Conservation																				.	.	.
Alig confidence																				.	.	.												.														.	.	.	.	.							.																				.
Template Conservation																																		.														.	.	.	.	.							.																				.
Template Sequence		F	Y	S	M	D	I	R	E	F	Q	L	P	S	S	Q	I	S	M	V	P	N	V	G	L	K	F	S	I	S	N	A	N	.	I	K	I	S	G	K	W	K	A	Q	K	R	F	.	.	.	.	.	L	K	M	S	G	N	.	F	D	L	S	I	E	G	M	S	I	S	A	D	L	K	L	G	S	N	.	P	T
Template Known Secondary structure																					T	T	T											.												T	T	.	.	.	.	.							.																				.	T	T
Template Predicted Secondary structure																																		.														.	.	.	.	.							.																				.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.							.	.
Query SS confidence																											.	.							.	.
Query Sequence		G	D	M	P	L	V	G	A	L	S	I	F	F	L	R	K	P	L	L	E	I	N	W	T	G	.	.	L	T	N	L	L	D	.	.	V	P	G	L	N	G	L	S	D	T	I	I	L	D	I	I	S	N	Y	L
Query Conservation																											.	.							.	.
Alig confidence												.															.	.							.	.
Template Conservation												.
Template Sequence		S	G	K	P	T	I	T	C	S	S	.	C	S	S	H	I	N	S	V	H	V	H	I	S	K	S	K	V	G	W	L	I	Q	L	F	H	K	K	I	E	S	A	L	R	N	K	M	N	S	Q	V	C	E	K	V
Template Known Secondary structure		T	T									.													T	T	S	S												T
Template Predicted Secondary structure												.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions