Return to main results Retrieve Phyre Job Id

Job DescriptionP42684
Confidence100.00%DateThu Apr 26 09:29:57 BST 2012
Rank10Aligned Residues287
% Identity90%Templated1opja_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290.........300.........310.........320.........330.........340.........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  TVYGVSPIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG
Query Conservation                          

 
 

 
           



              
      
 
 


    
Alig confidence 















































































Template Conservation     
  
      
          

 
  
 

 
        



         
    
      
 
 


    
Template Sequence  AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG
Template Known Secondary structure 


TTSTT

TTB

GGGTTTTTTSSGGGT

TT
S



TTB

Template Predicted Secondary structure 






























Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   350.........360.........370.........380.........390.........400.........410.........420.........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFG
Query Conservation            
 
    
 
   
                   
      

     




  
 
       

 


Alig confidence 















































































Template Conservation           

 
    
 
   
                   
       
     
  

  

        

 


Template Sequence  VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG
Template Known Secondary structure 
SSSS


TT
BS
TTTS
TT


S

SGGG
GGG




Template Predicted Secondary structure 























































Template SS confidence 















































































   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   430.........440.........450.........460.........470.........480.........490.........500.........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEG
Query Conservation   
                     


           
 

 
  
 
    
  
                        
Alig confidence 















































































Template Conservation   
                   
 


           

 


 




 
 
  

                       
Template Sequence  LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG
Template Known Secondary structure 
TTT

SSSSTT
GGG




STTS

SSTT

TT





TT
Template Predicted Secondary structure 

















































Template SS confidence 















































































   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   510.........520.........530.........540.........550......
Predicted Secondary structure 
















Query SS confidence 














































Query Sequence  CPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDSSISEEVAEEL
Query Conservation                  
  

                          
Alig confidence 














































Template Conservation      
  

   
   
  


  

   
  
              
Template Sequence  CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL
Template Known Secondary structure 

T
SSGGGS

TTSSS

Template Predicted Secondary structure 













Template SS confidence 














































   483......490.........500.........510.........520.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions