Job Description P42684 Confidence 100.00% Date Thu Apr 26 09:29:57 BST 2012 Rank 23 Aligned Residues 271 % Identity 39% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.						.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.														.	.																			.
Query SS confidence																																			.	.	.	.	.														.	.																			.
Query Sequence		P	I	H	D	K	W	E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	.	.	.	.	.	K	Y	S	L	T	V	A	V	K	T	L	K	E	.	.	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	.	K	H	P	N	L	V	Q	L
Query Conservation																																			.	.	.	.	.														.	.																			.
Alig confidence																																			.	.	.	.	.														.	.																			.
Template Conservation
Template Sequence		P	Y	D	H	K	W	E	F	P	R	N	R	L	S	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	H	L	T	E	R	E	A	L	M	S	E	L	K	V	L	S	Y	L	G	N	H	M	N	I	V	N	L
Template Known Secondary structure					G	G	G	B			G	G	G											S	S										S	S	S	S	T	T												T	T																							T	T	B
Template Predicted Secondary structure
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	V	C	T	L	E	P	P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	N	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	A	C	T	I	G	G	P	T	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M	E	D	D	E	L	A	L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A
Template Known Secondary structure							S	S	S	S									T	T		B									G	G	G	G	S		S	S	S					B	T	T	B																										T	T				S			S
Template Predicted Secondary structure
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	.	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		A	R	N	I	L	L	T	H	G	R	I	T	K	I	C	D	F	G	L	A	R	D	I	K	N	D	S	N	Y	V	V	K	G	N	A	R	L	P	V	K	W	M	A	P	E	S	I	F	N	C	V	Y	T	F	E	S	D	V	W	S	Y	G	I	F	L	W	E	L	F	S	L	G	S	S	P	Y	P	G	M	P
Template Known Secondary structure		G	G	G					T	T	T								G	G	G			G	G	G		T	T	S				T	T					G	G	G	S								T																				T	T	T			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		795	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.
			491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	P	E	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E	T	M	F	H	D	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	D	S	K	F	Y	K	M	I	K	E	G	F	R	M	L	S	P	E	H	A	P	A	E	M	Y	D	I	M	K	T	C	W	D	A	D	P	L	K	R	P	T	F	K	Q	I	V	Q	L	I	E	K	Q	I	S	E	S
Template Known Secondary structure			S									T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		875	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions