Job Description P42684 Confidence 100.00% Date Thu Apr 26 09:29:57 BST 2012 Rank 16 Aligned Residues 256 % Identity 20% Template c3c4yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a Resolution 7.51 Å

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.					.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		K	W	E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	L	K	E	D	T	M	E	.	.	.	.	V	E	E	F	L	K	E	A	A	V	M	K	E	I	K	H	P	N	L	V	Q	L	L	G	V	C	T	L	E	P
Query Conservation																																																.	.	.	.
Alig confidence																																																.	.	.	.
Template Conservation
Template Sequence		A	Q	P	M	G	E	D	W	F	L	D	F	R	V	L	G	R	G	G	F	G	E	V	F	A	C	Q	M	K	A	T	G	K	L	Y	A	C	K	K	L	N	K	K	R	L	K	K	R	K	G	Y	Q	G	A	M	V	E	K	K	I	L	A	K	V	H	S	R	F	I	V	S	L	A	Y	A	F	E	T	K	T
Template Known Secondary structure		S	S				G	G	G	B									S	S	S									T	T	T	T															T	T	T													T	T				T	T	B			B							S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		P	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	.	.	C	N	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	V	A	D	F	G	L	S	R	L
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		D	L	C	L	V	M	T	I	M	N	G	G	D	I	R	Y	H	I	Y	N	V	D	E	D	N	P	G	F	Q	E	P	R	A	I	F	Y	T	A	Q	I	V	S	G	L	E	H	L	H	Q	R	N	I	I	Y	R	D	L	K	P	E	N	V	L	L	D	D	D	G	N	V	R	I	S	D	L	G	L	A	V	E
Template Known Secondary structure												S								T	T	T	S	S	S	S		S																							T	S	B							G	G	G					S	S	S								S	S			B
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.			490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		M	T	G	D	T	Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	.	.	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	P	E	G	C	P
Query Conservation																																																										.	.
Alig confidence												.																																					.									.	.														.
Template Conservation												.																																					.																								.
Template Sequence		L	K	A	G	Q	T	K	T	K	G	.	Y	A	G	T	P	G	F	M	A	P	E	L	L	L	G	E	E	Y	D	F	S	V	D	Y	F	A	L	G	V	T	L	Y	E	M	I	A	.	A	R	G	P	F	R	A	R	G	V	E	N	K	E	L	K	Q	R	V	L	E	Q	A	.	V	T	Y	P	D	K	F	S
Template Known Secondary structure				S	S				B			.			S		T	T	T	S						T	T			B		T															T	T	.	S	S		S	S	S															T			.					S	S
Template Predicted Secondary structure												.																																					.																								.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.						530	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	.	.	.	.	.	P	S	F	A	E	T	H	Q	A
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.
Template Conservation
Template Sequence		P	A	S	K	D	F	C	E	A	L	L	Q	K	D	P	E	K	R	L	G	F	R	D	G	S	C	D	G	L	R	T	H
Template Known Secondary structure												T		S	S	S	S	S	S			S		T	T	S	T	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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