Job Description P42684 Confidence 100.00% Date Thu Apr 26 09:29:57 BST 2012 Rank 165 Aligned Residues 249 % Identity 20% Template c2onlD_ PDB info PDB header:transferase Chain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer Resolution 4.00 Å

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		288	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.
Predicted Secondary structure													.																																										.															.	.	.	.
Query SS confidence													.																																										.															.	.	.	.
Query Sequence		I	T	M	K	H	K	L	G	G	G	Q	.	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	L	K	E	D	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	.	K	H	P	N	L	V	Q	L	L	G	V	C	T	L	.	.	.	.	E	P	P	F	Y	I	V	T
Query Conservation													.																																										.															.	.	.	.
Alig confidence													.																									.	.	.	.														.															.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		V	K	S	G	L	Q	I	K	K	N	A	I	I	D	D	V	L	Q	I	F	N	K	R	T	Q	E	K	F	A	L	K	M	L	Q	D	C	.	.	.	.	P	K	A	R	R	E	V	E	L	H	W	R	A	S	Q	C	P	H	I	V	R	I	V	D	V	Y	E	N	L	Y	A	G	R	K	C	L	L	I	V	M
Template Known Secondary structure									B		S			S									T	T	T												S	.	.	.	.												T	T			S	T	T	B												T	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.				420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	N	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	.	.	.	N	H	V	V	K	V	A	D	F	G	L	S	R	L	M	T	G	D	T
Query Conservation																																																												.	.	.
Alig confidence																																																												.	.	.
Template Conservation
Template Sequence		E	C	L	D	G	G	E	L	F	S	R	I	Q	D	R	G	D	Q	A	F	T	E	R	E	A	S	E	I	M	K	S	I	G	E	A	I	Q	Y	L	H	S	I	N	I	A	H	R	D	V	K	P	E	N	L	L	Y	T	S	K	R	P	N	A	I	L	K	L	T	D	F	G	F	A	K	E	T	T	S	H	N
Template Known Secondary structure						S									S		S	S				B																					T	T								G	G	G				S	S	S	S	T	T									S	S						S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	A	H	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	L	S	Q	V	Y	D	L	L	E	K	G	Y	R	M	E	Q	P	E	G	C	P	P	K	V	Y	E	L	M
Query Conservation
Alig confidence						.	.																																					.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																																					.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	T	T	.	.	P	C	Y	T	P	Y	Y	V	A	P	E	V	L	G	P	E	K	Y	D	K	S	C	D	M	W	S	L	G	V	I	M	Y	I	L	L	C	.	G	Y	P	P	F	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	N	P	E	W	S	E	V	S	E	E	V	K	M	L	I
Template Known Secondary structure						.	.	S	S			S	S	S							S	S	S																				T	.	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.		S		T	T	T	T			S		T	T
Template Predicted Secondary structure						.	.																																					.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.														.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E	T	M	F	H	D	S	S	I	S	E	E	V	A	E	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	L	L	K	T	E	P	T	Q	R	M	T	I	T	E	F	M	N	H	P	W	I	M	Q	S	T	K	V	P	Q	T	P	L	H	T	S	R
Template Known Secondary structure				T	T	T			S	S										S						T		S	S	S				B		S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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