Job Description P42684 Confidence 100.00% Date Thu Apr 26 09:29:57 BST 2012 Rank 169 Aligned Residues 271 % Identity 13% Template c2jiiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3 Resolution 2.00 Å

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		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.												.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	E	R	T	D	I	T	M	K	H	K	L	G	G	G	Q	Y	G	E	V	Y	V	G	V	W	K	K	Y	S	L	T	V	A	V	K	T	L	K	E	D	.	.	.	.	.	.	.	.	.	.	.	T	M	E	V	E	E	F	L	K	E	A	A	V	M	K	E	I	K	H	P	N	L	V	Q	L	L	G	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.
Template Sequence		D	K	S	G	R	Q	W	K	L	K	S	F	Q	T	R	D	N	Q	G	I	L	Y	E	A	A	P	T	S	K	.	.	.	F	S	L	K	L	D	A	K	D	G	R	L	F	N	E	Q	N	F	F	Q	R	A	A	K	P	L	Q	V	N	K	W	K	K	L	Y	S	T	P	L	L	A	I	P	T	C	M	G	F
Template Known Secondary structure			T	T	S													T	T												.	.	.								T	T	S	T																								T	T		T	T		S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		351	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.
Predicted Secondary structure								.																																																																					.	.
Query SS confidence								.																																																																					.	.
Query Sequence		C	T	L	E	P	P	.	F	Y	I	V	T	E	Y	M	P	Y	G	N	L	L	D	Y	L	R	E	C	N	R	E	E	V	T	A	V	V	L	L	Y	M	A	T	Q	I	S	S	A	M	E	Y	L	E	K	K	N	F	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	H	V	V	K	.	.	V	A	D
Query Conservation								.																																																																					.	.
Alig confidence								.									.																																																												.	.
Template Conservation																	.
Template Sequence		G	V	H	Q	D	K	Y	R	F	L	V	L	P	S	L	.	G	R	S	L	Q	S	A	L	D	V	S	P	K	H	V	L	S	E	R	S	V	L	Q	V	A	C	R	L	L	D	A	L	E	F	L	H	E	N	E	Y	V	H	G	N	V	T	A	E	N	I	F	V	D	P	E	D	Q	S	Q	V	T	L	A	G
Template Known Secondary structure					T	T	T										.											S	G	G	G																								T	T		B		S				G	G	G					T	T
Template Predicted Secondary structure																	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.							.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490						.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.																																																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.																																																	.	.	.	.	.
Query Sequence		F	G	L	S	R	L	M	T	G	D	T	Y	T	A	H	.	.	.	.	.	.	A	G	A	K	F	P	I	K	W	T	A	P	E	S	L	A	Y	N	T	F	S	I	K	S	D	V	W	A	F	G	V	L	L	W	E	I	A	T	Y	G	M	S	P	Y	P	G	I	D	.	.	.	.	.	L	S	Q	V	Y	D
Query Conservation																	.	.	.	.	.	.																																																	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																																							.										.	.	.	.	.
Template Conservation																																																													.
Template Sequence		Y	G	F	A	F	R	Y	C	P	S	G	K	H	V	A	Y	V	E	G	S	R	S	P	H	E	G	D	L	E	F	I	S	M	D	L	H	K	G	C	G	P	S	R	R	S	D	L	Q	S	L	G	Y	C	M	L	K	W	L	Y	.	G	F	L	P	W	T	N	C	L	P	N	T	E	D	I	M	K	Q	K	Q
Template Known Secondary structure		G	G	G		B		S	S	G	G	G							T	T	S	S		T	T		S		T	T	T							T	T																						.	S			T	T	G	G	G	T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.						.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		L	L	E	K	G	Y	R	M	E	Q	P	E	.	.	.	.	.	G	C	P	P	K	V	Y	E	L	M	R	A	C	W	K	W	S	P	A	D	R	P	S	F	A	E	T	H	Q	A	F	E	T	M	F	H	D	S	S	I	S	E	E	V	A	E	E	L	G
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		K	F	V	D	K	P	G	P	F	V	G	P	C	G	H	W	I	R	P	S	E	T	L	Q	K	Y	L	K	V	V	M	A	L	T	Y	E	E	K	P	P	Y	A	M	L	R	N	N	L	E	A	L	L	Q	D	L	R	V	S	P	Y	D	P	I	G	L	P
Template Known Secondary structure						S							T	T	S																		T			T	T																			T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions