Return to main results Retrieve Phyre Job Id

Job DescriptionP42684
Confidence99.32%DateThu Apr 26 09:29:57 BST 2012
Rank454Aligned Residues65
% Identity38%Templatec2cucA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:sh3 domain containing ring finger 2; PDBTitle: solution structure of the sh3 domain of the mouse2 hypothetical protein sh3rf2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.........150.... .....160.......
Predicted Secondary structure 

































.








Query SS confidence 



















































.












Query Sequence  GATESDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWSEVRSKNGQ. GWVPSNYITPVNS
Query Conservation                                                      .
  
         
Alig confidence 



















































.












Template Conservation 
          

 

 
    


   

 
 

     


       
  
 

  

  
  
Template Sequence  GSSGSSGNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSG
Template Known Secondary structure 



SSS



S
B


STTB

B
TT
TTTTT

GGG



Template Predicted Secondary structure 


































Template SS confidence 

































































   1........10.........20.........30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions