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Job DescriptionP42684
Confidence100.00%DateThu Apr 26 09:29:57 BST 2012
Rank74Aligned Residues251
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   285....290.........300.........310.........320. ........330.........340.........350.........360.
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Query Sequence  RTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE. . . DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVT
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF
Template Known Secondary structure  TTTTTTTT


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TTB


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   362.......370.........380.........390.........400.........410........ .420.........430........
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Query Sequence  EYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG. . . ENHVVKVADFGLSRLMTGDT
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Template Sequence  DLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE
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B..TT
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   90.........100. ........110.........120.........130.........140.........150.........160.......
 
   439440.........450.........460.........470.........480.........490.........500....... ..510.....
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Query Sequence  YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQP. . . EGCPPKVY
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Template Sequence  AWHG. . FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  B


..S
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   169170.. .......180.........190.........200........ .210.........220.........230.........240.....
 
   516...520.........530.........540
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Query Sequence  ELMRACWKWSPADRPSFAETHQAFE
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Template Sequence  SLIDSMLTVNPKKRITADQALKVPW
Template Known Secondary structure  S
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   246...250.........260.........270
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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